Egg Bites with Cottage Cheese Recipe
This Egg Bites Recipe easily recreates the Starbucks favorite at home! This easy breakfast fits a high protein, low-carb diet with one cheesy secret ingredient.

Breakfast can be chaotic, especially when you need something quick, filling, and that actually tastes good. Thatโs why Iโve spent years experimenting with grab-and-go breakfast recipes that work for my family and, I hope, yours. These egg bites are gluten free, low carb, and protein-packed, making them a satisfying breakfast that fits my husbandโs dietary needs as a diabetic with celiac disease.
After testing countless variations, this combination of bacon, eggs, and cottage cheese has become one of our favorites. Theyโre flavorful, filling, and simple to make, delivering a reliable breakfast that works every time.
Why Youโll Love These Egg Bites
These are a go-to snack food in my house. Here are some reasons why youโll love this recipe.
- Filling. These egg bites have a nice amount of protein so they’ll keep you full for longer.
- Super easy to make. This recipe only has 4 ingredients (plus salt and pepper). It takes just 10 minutes of prep time. I know Starbucks uses the French sous vide method, but we get that great texture even easier by using a water bath.
- Classic flavors. Itโs hard to beat the combination of bacon, eggs, and cheese. This combination is kid-friendly and pleases a crowd.

Ingredients for Egg Bites with Cottage Cheese
Here are all the ingredients you need to make this rich egg bite recipe. For the exact amounts of each ingredient, scroll to the printable recipe card.
- Eggs โ Size large. These provide tons of protein. I have not tried commercial substitutes, but I imagine those would work as well.
- Cottage cheese โ This adds protein, flavor, and a great texture. You could replace this with full-fat Greek yogurt, ricotta cheese, or sour cream if you prefer.
- Bacon โ Cooked and crumbled. This adds more protein and tastes amazing. Replace with diced ham, crumbled breakfast sausage, meat-free bacon substitutes, or chopped bell peppers if you want.
- Shredded gruyรจre cheese โ This is the cheese that Starbucks uses for theirs, and it provides a rich, nutty, salty flavor. You could swap with mozzarella, pepper jack, or sharp cheddar cheese if you like.
- Salt and Pepper โ Be sure to use freshly ground black pepper and kosher salt for the best flavor.
How to Make Egg Bites
Hereโs how to make these melty egg bites, you’ll only need a muffin pan (mini for 24, standard for 12) and 9×13 baking dish. It couldnโt be easier!
- Mix the wet ingredients. Add the eggs and cottage cheese to a mixing bowl, and whisk until combined.
- Add the rest of the ingredients. Fold in the bacon and the gruyere cheese, then season with salt and pepper.



3. Portion the batter. Spoon the batter into a muffin tray or silicone muffin tins until theyโre about ยพ full.
4. Make a water bath. Put about an inch of water in a 9×13-inch baking dish. This will help the eggs cook evenly, and keep them moist. Put the muffin tins into the water bath.
5. Bake. Put the baking dish in the oven and bake until the eggs are cooked through. This should take 25-30 minutes.


Tips and Variations
- Donโt overcook. Your egg bites will keep cooking as they cool after you remove them from the oven. They should be set but still soft when you take them out.
- Add your own seasonings.Ingredients like fresh garlic, parsley, basil, paprika, chili powder, and chives would all be great in this recipe.
- TIP: Starbucks actually includes a little hot sauce in their version. I left it out so these would be kid-friendly, but feel free to add a bit to your preference!
- Try different mix-ins. Different meats, cheeses, and veggies can all be substituted as long as they are finely chopped (and meats should already be cooked). Starbucks egg bites already come in two other varieties you can recreate:
- Kale and Mushroom version: Remove the bacon and gruyere cheese. Use Monterey Jack cheese, then add 3/4 (total) of finely chopped kale and mushrooms
- Egg White and Roasted Red Pepper version: Replace each egg with 2 egg whites. Use Monterey Jack cheese instead of gruyere. Instead of 3/4 cup bacon, use 3/4 cup of chopped, roasted red peppers.
How to Store Egg Bites
Allow your egg bites to cool completely before storing them in an airtight container. They will last up to 4-5 days in the refrigerator, or you can freeze them for long-term meal prepping. To freeze, place them on a plate or baking sheet in a single layer, not touching. Freeze for 2-3 hours or until solid, then transfer to a freezer-safe bag. Enjoy within 3 months for the best taste and texture.

Get the Recipe: Egg Bites
Ingredients
- 7 large eggs
- 1/2 cup cottage cheese
- 3/4 cup cooked and chopped bacon
- 3/4 cup shredded gruyere cheese
- Salt and pepper to taste
Equipment
Instructions
- Preheat the oven to 325F.
- In a large mixing bowl, whisk the eggs and the cottage cheese until well combined.
- Fold in the bacon and the shredded cheese, then add salt and pepper to taste.
- Spoon the mixture into a silicone muffin pan until each well is 3/4 full.
- Add about an inch of water to a 9×13-inch baking dish. Place the silicone muffin tin inside the baking dish so the eggs can cook slowly in a water bath.
- Cook the egg bites for 25-30 minutes if you're using a mini muffin size pan or 20-24 minutes if you are using a standard size muffin pan. Eggs should be cooked through when finished.
Notes
- If you do not have a 9×13-inch baking pan that the muffin tin will set inside, you can fill a casserole dish with an inch of water and place it on the bottom rack of the oven. Then cook the egg bites on the middle or top rack.
- You can blend the eggs and cottage cheese in a blender until smooth if you dislike the texture of cottage cheese curds.
- Storage: Store in an airtight container in the fridge for 4 days, or in the freezer for 3 months. Reheat in a 350F oven for 5-10 minutes, or in a microwave on 80% power in 20-second increments.
- Freezer: theyโll last for 3 months if stored in an airtight container. You can reheat them directly from the freezer in the oven, though theyโll need an additional 2-3 minutes.ย
More Egg Recipes
- Instant Pot Egg Bites
- Bacon Egg and Cheese Bites
- Keto Sausage Egg and Cheese Bites
- Bacon Egg and Zucchini Bites
- Denver Omelet Keto Bites

great for ham and Cheddar egg bites too. just sub the meat and cheese
Have you ever tried these in an air fryer?
Hello,
I was wondering if when making the egg bites you use regular sized muffing tins or the mini ones. Also, can cream cheese be substituted for the cottage cheese?
Thank you
Hi Christy, this is a standard, regular size 12 count muffin tin. Cream cheese can be used, but it doesn’t blend quite as easily. You will need to let it come to room temperature before using in this recipe. I hope you enjoy!
1X recipe does not make 24 egg muffins. It barely made 12. You have to double the recipe to get 24.ย
Yes it does. It sounds like you used the wrong size muffin pan. The recipe indicates to use a 24 count mini muffin tin.
Sorry for my confusion. I see in the recipe directions to use a 24 count mini muffin pan, but the pictures show a 12 count muffin pan and you told someone that left a comment that you used a 12 count regular size muffin tin.ย
I used a 12 count pan and doubled the recipe to get 24.ย
Needless to say, I loved these egg bites and am making them again tonight for my breakfast for the week.ย
I love how quick the prep is and the simple whole ingredients.
I apologize, in all of our egg bite recipes, we got a little bit confused! We ran some tests and have now updated the recipe for both standard-size and mini-size egg bites. I’m so glad that you’ve enjoyed these bites as much as we have! Thanks so much for working with us through the miscommunications!
If making half the recipe, would the baking time be the same or half the baking time?ย
Hi Amber, if you are baking them in the same size muffin tins the cooking time will be the same. Enjoy!